PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053800.60
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 239aa    MW: 25879.4 Da    PI: 7.3495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053800.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47e-1082129454
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   ++  rE+ RRdr+N++f  L ++l +    + +K +Ka+iL  +v+ + +L
  EcC053800.60  82 SKACREKLRRDRLNDKFLGLASILEPG---SPPKTDKAAILIDVVRMVTQL 129
                   6789**********************7...78*************999888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.09378129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-782129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-1182152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-1283154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-684135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.80E-786134No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006888Biological ProcessER to Golgi vesicle-mediated transport
GO:0055114Biological Processoxidation-reduction process
GO:0000287Molecular Functionmagnesium ion binding
GO:0003723Molecular FunctionRNA binding
GO:0010333Molecular Functionterpene synthase activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MVSPEQANWI YDCGLIDDIP AAAADGGPFQ VSGSGFSWPD QPLNGSSIFS AEIDGSLGDS  60
DGVKENGSKK RVRSESCSAS SSKACREKLR RDRLNDKFLG LASILEPGSP PKTDKAAILI  120
DVVRMVTQLR GEAQKLKDSN SSLQEKIKEL KAEKNELRDE KQRLKAEKEK LEHQLKAMNA  180
QPSFLPPPPA IPAAFATQGQ APGNKLVPFI GYPGVAMWQF MPPATVDTSQ DHVLRPPVA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062961.11e-173PREDICTED: transcription factor ILR3-like isoform X1
SwissprotQ9FH371e-123ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A059BVZ91e-148A0A059BVZ9_EUCGR; Uncharacterized protein
STRINGVIT_19s0014g05100.t011e-129(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.17e-98bHLH family protein